chr3 : 99,641,681 99,642,031
350 bp 17 TFs 1 linked gene
This 350 bp open chromatin element is linked to COL8A1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
COL8A1 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:99,636,681 – 99,647,031
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 242 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 350 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 114 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 350 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 149 bp overlap
ChIP DE DE-FOXA2-2 87 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 214 bp overlap
ChIP DE DE-GATA4-2 236 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 258 bp overlap
ChIP DE DE-GATA6-2 199 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 182 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 165 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 153 bp overlap
ChIP GM12878 ENCFF918AID 159 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 124 bp overlap
MED1 3 datasets
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 116 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 350 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 350 bp overlap
POLR2A 2 datasets
ChIP endothelial cell of umbilical vein ENCFF467WJF 350 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 108 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 101 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 195 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 306 bp overlap
SMAD3 2 datasets
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 99 bp overlap
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 350 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 331 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 350 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 157 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 97 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 200 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 213 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 126 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 182 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 350 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 282 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 106 bp overlap