chr3 : 30,320,496 30,320,827
331 bp 17 TFs 0 linked genes
This 331 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:30,315,496 – 30,325,827
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 101 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 331 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 331 bp overlap
EGR1 1 dataset
ChIP fibroblast_EtOH-24h GSE134924.EGR1.fibroblast_EtOH-24h 136 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 206 bp overlap
FOXA1 9 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 120 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 203 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 187 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 279 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 160 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 319 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 241 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 304 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 185 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 195 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 187 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 152 bp overlap
ChIP DE DE-FOXA2-1 331 bp overlap
ChIP DE DE-FOXA2-2 331 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 240 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 295 bp overlap
ChIP DE DE-GATA4-2 331 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 288 bp overlap
ChIP DE DE-GATA6-2 331 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 159 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 286 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 250 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 148 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 209 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RAD21 1 dataset
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 127 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 272 bp overlap
SP1 1 dataset
ChIP A-375_DMSO GSE68044.SP1.A-375_DMSO 126 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap