Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

22 transcription factors

BATF3 1 dataset

ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 185 bp overlap

BCL11A 2 datasets

ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 92 bp overlap

ChIP WA01 ENCSR000BIP.BCL11A.WA01 107 bp overlap

CTCF 3 datasets

ChIP C4-2B ENCFF821XVN 161 bp overlap

ChIP VCaP ENCFF858YQT 59 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 190 bp overlap

DUX4 1 dataset

Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap

Dux 1 dataset

Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap

EP300 1 dataset

ChIP hESC GSE17917.EP300.hESC 200 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 243 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 385 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 385 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 326 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 385 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 376 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 234 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 282 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 271 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 302 bp overlap

LHX6 1 dataset

Motif ES_0h ES_0h-LHX6_MA0658.2 8 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 257 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 115 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 385 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 317 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 135 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 332 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 358 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 283 bp overlap

ChIP hESC GSE20650.NANOG.hESC 183 bp overlap

ChIP hESC GSE18292.NANOG.hESC 202 bp overlap

POU3F2 1 dataset

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU5F1 6 datasets

ChIP GM23338 ENCFF333SNB 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 385 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 385 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 116 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 383 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 309 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

SMAD2-3 2 datasets

ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 141 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 205 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 231 bp overlap

SMARCA4 3 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 385 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 260 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 385 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 214 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 319 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 131 bp overlap

ChIP ESC S25-ESC-d0-BAF155-exp1 223 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 385 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 244 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 118 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 385 bp overlap

Genome Browser