Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

18 transcription factors

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 280 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 254 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 280 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 280 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 253 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 280 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 280 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 206 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 272 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 280 bp overlap

ChIP DE DE-FOXA2-2 280 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 280 bp overlap

ChIP DE DE-GATA4-2 280 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 280 bp overlap

ChIP DE DE-GATA6-2 280 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 280 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 280 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 280 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 280 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 280 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 280 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 259 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 271 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 280 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 280 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 280 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 248 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 251 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 280 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 272 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 280 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 280 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 280 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 198 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 263 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 213 bp overlap

Genome Browser