Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

18 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 229 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 330 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 438 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 474 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 318 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 359 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 446 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 304 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 261 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 429 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 307 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 640 bp overlap

ChIP DE DE-FOXA2-2 608 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 615 bp overlap

ChIP DE DE-GATA4-2 650 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 617 bp overlap

ChIP DE DE-GATA6-2 650 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 406 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 467 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 275 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 223 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 336 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 363 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 272 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 459 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 253 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 330 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 247 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 433 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 441 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 464 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 556 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 189 bp overlap

Genome Browser