chr2 : 55,622,456 55,622,938
482 bp 8 TFs 2 linked genes
This 482 bp open chromatin element is linked to PPP4R3B-DT and PPP4R3B and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PPP4R3B-DT 4.6 kb Proximal Proximity
PPP4R3B 4.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:55,617,456 – 55,627,938
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 170 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 343 bp overlap
ChIP DE DE-FOXA2-2 337 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 108 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 482 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 337 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 383 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 439 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 324 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 275 bp overlap