chrX : 48,921,656 48,922,006
350 bp 22 TFs 2 linked genes
This 350 bp open chromatin element is linked to PIM2 and SLC35A2 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PIM2 2.6 kb Proximal Proximity
SLC35A2 10.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:48,916,656 – 48,927,006
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 322 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 180 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 275 bp overlap
FOSL1 3 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 79 bp overlap
ChIP K562 ENCFF455MKD 123 bp overlap
ChIP K562 ENCFF455MKD 344 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 350 bp overlap
ChIP DE DE-FOXA2-2 350 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 350 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 232 bp overlap
ChIP DE DE-GATA6-2 350 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 307 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 344 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 350 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 330 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 52 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 135 bp overlap
POLR2A 3 datasets
ChIP HeLa-S3 ENCFF224LWS 102 bp overlap
ChIP K562 ENCFF514URW 157 bp overlap
ChIP K562 ENCFF514URW 313 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 105 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 218 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 350 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 164 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 350 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 237 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 214 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 98 bp overlap