chrX : 43,239,101 43,239,693
592 bp 34 TFs 0 linked genes
This 592 bp open chromatin element has no linked target genes and is bound by 34 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:43,234,101 – 43,244,693
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dmbx1 1 dataset
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 460 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 314 bp overlap
ETV1 1 dataset
Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 124 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 541 bp overlap
ChIP DE DE-FOXA2-2 526 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 558 bp overlap
ChIP DE DE-GATA4-2 560 bp overlap
ChIP foregut GSE117136.GATA4.foregut 409 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 309 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 592 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 461 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 295 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 462 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 475 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 481 bp overlap
ChIP foregut GSE117136.GATA6.foregut 450 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 281 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 259 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 393 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 303 bp overlap
NKX2-5 1 dataset
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 157 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 256 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 592 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 348 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 385 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 464 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 458 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 268 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 327 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 394 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 439 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 276 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 197 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 177 bp overlap