Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

19 transcription factors

AR 1 dataset

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 292 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 282 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 403 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 301 bp overlap

ChIP DE DE-FOXA2-2 403 bp overlap

GATA1 2 datasets

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 107 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 187 bp overlap

GATA2 4 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 117 bp overlap

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 254 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 389 bp overlap

GATA3 1 dataset

ChIP A1A3_Dex GSE112491.GATA3.A1A3_Dex 266 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 181 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 158 bp overlap

ChIP DE DE-GATA4-1 403 bp overlap

ChIP DE DE-GATA4-2 403 bp overlap

ChIP foregut GSE117136.GATA4.foregut 403 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 403 bp overlap

ChIP DE DE-GATA6-2 403 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 308 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 403 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 403 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 403 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 403 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 403 bp overlap

ChIP foregut GSE117136.GATA6.foregut 337 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 337 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 251 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 392 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 299 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 403 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 403 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 176 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 273 bp overlap

SMARCA4 1 dataset

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 163 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 368 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 262 bp overlap

Genome Browser