chr20 : 7,358,797 – 7,358,962
165 bp 17 TFs 0 linked genes
This 165 bp open chromatin element has no linked target genes and is bound by 17 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:7,353,797 – 7,363,962
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CTCF 183 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 165 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 165 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 165 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 123 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 165 bp overlap
ChIP AG09319 ENCFF401ZTN 165 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 125 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 149 bp overlap
ChIP DOHH2 ENCFF637WNW 165 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 165 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 128 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 102 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 165 bp overlap
ChIP GM12874 ENCFF942MTD 165 bp overlap
ChIP GM13977 ENCFF528ESQ 165 bp overlap
ChIP GM23338 ENCFF531QOI 165 bp overlap
ChIP GM23338 ENCFF531QOI 96 bp overlap
ChIP GM23338 ENCFF772DML 146 bp overlap
ChIP H1 ENCFF230QSV 141 bp overlap
ChIP H1 ENCFF414GZI 165 bp overlap
ChIP H1 ENCFF764RHO 165 bp overlap
ChIP H9 ENCFF152GTF 165 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 165 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 165 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 165 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 165 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 165 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 165 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 165 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 165 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 165 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 165 bp overlap
ChIP HEK293 ENCFF498RMM 165 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 165 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 126 bp overlap
ChIP HFF-Myc ENCFF680WYR 165 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 160 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 115 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 147 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 165 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF127KUP 165 bp overlap
ChIP HepG2 ENCFF194VBQ 165 bp overlap
ChIP HepG2 ENCFF348BUL 153 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 165 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 165 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 151 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 154 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 129 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 104 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 165 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 165 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 165 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 130 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 137 bp overlap
ChIP Loucy ENCFF359TVQ 165 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 165 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 147 bp overlap
ChIP MCF-7 ENCFF198DQX 165 bp overlap
ChIP MCF-7 ENCFF494VXA 165 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 165 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 165 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 165 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 165 bp overlap
ChIP OCI-LY1 ENCFF455ESK 165 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 165 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 153 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 165 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 165 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 165 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 165 bp overlap
ChIP PC-3 ENCFF487TUI 165 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 165 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 165 bp overlap
ChIP RWPE2 ENCFF911IEE 165 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 149 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 155 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 114 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 123 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 165 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 137 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 165 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 146 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 151 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 161 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 165 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 165 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 165 bp overlap
ChIP WTC11 ENCFF658QVH 165 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 165 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 165 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 165 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 129 bp overlap
ChIP brain ENCFF163BBN 165 bp overlap
ChIP brain ENCFF685VRG 165 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 165 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 146 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 165 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 165 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 135 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 165 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 165 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 165 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF784LWO 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 165 bp overlap
ChIP endodermal cell ENCFF471YCZ 165 bp overlap
ChIP endothelial cell ENCFF663LIE 165 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 163 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 165 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 165 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 165 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 157 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 165 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 129 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 165 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 146 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 165 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 165 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 165 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 164 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 110 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 152 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 165 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 165 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 149 bp overlap
ChIP hESC GSE20650.CTCF.hESC 137 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 165 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 165 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 165 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 165 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 165 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 165 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 165 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 165 bp overlap
ChIP heart left ventricle ENCFF244ZHV 165 bp overlap
ChIP heart left ventricle ENCFF548XHH 165 bp overlap
ChIP heart right ventricle ENCFF027ORH 165 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 165 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 116 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 163 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 165 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 123 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 165 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 165 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 165 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 165 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 165 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 165 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 165 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 165 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 165 bp overlap
ChIP islet ERP004003.CTCF.islet 165 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 100 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 150 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 165 bp overlap
ChIP myotube ENCFF981UHL 165 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 138 bp overlap
ChIP nephron ENCFF589HXU 165 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 165 bp overlap
ChIP neural progenitor cell ENCFF420RBO 165 bp overlap
ChIP neural progenitor cell ENCFF581WPG 165 bp overlap
ChIP neural progenitor cell ENCFF581WPG 165 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 165 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 152 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 165 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 165 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 159 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 165 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 165 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 165 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 165 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 165 bp overlap
ChIP right atrium auricular region ENCFF696NTN 165 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 165 bp overlap
CTCFL 1 dataset
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 165 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 165 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 55 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 57 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 165 bp overlap
ChIP HepG2 ENCFF570ABM 123 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 71 bp overlap
RAD21 23 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 113 bp overlap
ChIP A549 ENCFF047SFC 165 bp overlap
ChIP GM12878 ENCFF101UQZ 165 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 165 bp overlap
ChIP H1 ENCFF698EWO 160 bp overlap
ChIP H1 ENCFF967OJF 165 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 165 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 165 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 120 bp overlap
ChIP HepG2 ENCFF906QIS 165 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 156 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 147 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 139 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 165 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 165 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 165 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 165 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 165 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 165 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 165 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 165 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 165 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 165 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 100 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 113 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 165 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 159 bp overlap
STAG1 3 datasets
ChIP HCAEC GSE101921.STAG1.HCAEC 165 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 140 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 122 bp overlap
STAG2 2 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 148 bp overlap
ChIP HL-60 GSE131577.STAG2.HL-60 118 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 97 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 105 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZNF677 1 dataset
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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