chr19 : 52,599,357 52,599,636
279 bp 9 TFs 2 linked genes
This 279 bp open chromatin element is linked to ENSG00000290073 and ZNF137P and is bound by 9 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000290073 1.6 kb Proximal Proximity
ZNF137P 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:52,594,357 – 52,604,636
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 279 bp overlap
ChIP DE DE-FOXA2-2 279 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 279 bp overlap
ChIP DE DE-GATA4-2 279 bp overlap
ChIP foregut GSE117136.GATA4.foregut 279 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 277 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 256 bp overlap
ChIP AGS GSE51936.GATA6.AGS 79 bp overlap
ChIP DE DE-GATA6-1 279 bp overlap
ChIP DE DE-GATA6-2 279 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 279 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 279 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 275 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 261 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 279 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 234 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap
ChIP foregut GSE117136.GATA6.foregut 279 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 250 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 279 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 279 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 201 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 148 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 250 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 192 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 249 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 279 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 246 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 250 bp overlap
TEAD4 2 datasets
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 246 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 152 bp overlap
YY1AP1 1 dataset
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 159 bp overlap