chr19 : 21,856,706 21,857,377
671 bp 16 TFs 1 linked gene
This 671 bp open chromatin element is linked to ZNF43 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZNF43 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:21,851,706 – 21,862,377
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AR 3 datasets
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 258 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 207 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 224 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 111 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 76 bp overlap
CTCF 15 datasets
ChIP GM23338 ENCFF531QOI 299 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 129 bp overlap
ChIP VCaP ENCFF858YQT 401 bp overlap
ChIP VCaP ENCFF858YQT 201 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 287 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 453 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 254 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 281 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 185 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 148 bp overlap
ChIP stomach ENCFF370OWL 312 bp overlap
ChIP thyroid gland ENCFF300RYK 284 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 374 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 351 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 249 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 235 bp overlap
FOXA1 8 datasets
ChIP LAPC-4_CST_V5 GSE123618.FOXA1.LAPC-4_CST_V5 188 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 290 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 270 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 186 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 150 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 314 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 228 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 185 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 671 bp overlap
ChIP DE DE-FOXA2-2 617 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 475 bp overlap
ChIP DE DE-GATA4-2 510 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 490 bp overlap
ChIP DE DE-GATA6-2 472 bp overlap
HOXB13 5 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 134 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 180 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 285 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 145 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 188 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 257 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 599 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 203 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 182 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap