chr19 : 20,257,902 20,258,459
557 bp 17 TFs 1 linked gene
This 557 bp open chromatin element is linked to ENSG00000213985 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000213985 182 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,252,902 – 20,263,459
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BARHL1 1 dataset
Motif DE_48h DE_48h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_48h DE_48h-BARHL2_MA0635.2 6 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 225 bp overlap
ChIP BLaER1 ENCFF364PUR 250 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 502 bp overlap
ChIP DE DE-FOXA2-2 468 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 138 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 447 bp overlap
ChIP DE DE-GATA4-2 492 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 441 bp overlap
ChIP DE DE-GATA6-2 449 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 374 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 326 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 408 bp overlap
HAND2 1 dataset
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_48h DE_48h-MEIS2_MA1640.2 9 bp overlap
PBX1 1 dataset
Motif DE_48h DE_48h-PBX1_MA0070.2 9 bp overlap
PBX2 1 dataset
Motif DE_48h DE_48h-PBX2_MA1113.3 9 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 492 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 371 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 499 bp overlap
ZNF274 1 dataset
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap