chr18 : 26,664,459 26,664,656
197 bp 8 TFs 2 linked genes
This 197 bp open chromatin element is linked to KCTD1 and AQP4-AS1 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
KCTD1 7.1 kb Proximal Proximity
AQP4-AS1 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:26,659,459 – 26,669,656
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 197 bp overlap
ChIP DE DE-FOXA2-2 197 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 197 bp overlap
ChIP DE DE-GATA4-2 197 bp overlap
ChIP foregut GSE117136.GATA4.foregut 197 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 197 bp overlap
ChIP DE DE-GATA6-2 197 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 197 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 197 bp overlap
ChIP foregut GSE117136.GATA6.foregut 197 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 197 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 197 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 128 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 197 bp overlap
SOX2 2 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 139 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 197 bp overlap