chr18 : 5,902,128 5,902,348
220 bp 10 TFs 3 linked genes
This 220 bp open chromatin element is linked to ENSG00000264449, ENSG00000266846, and TMEM200C and is bound by 10 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000264449 6.4 kb Proximal Proximity
ENSG00000266846 6.4 kb Proximal Proximity
TMEM200C 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:5,897,128 – 5,907,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 112 bp overlap
ChIP BLaER1 ENCFF335XTP 203 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 95 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 220 bp overlap
ChIP DE DE-GATA4-2 220 bp overlap
ChIP foregut GSE117136.GATA4.foregut 220 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 220 bp overlap
ChIP DE DE-GATA6-2 220 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 220 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 207 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 220 bp overlap
ChIP foregut GSE117136.GATA6.foregut 220 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 220 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 181 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 170 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 218 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 220 bp overlap