chr16 : 81,083,340 81,084,144
804 bp 13 TFs 7 linked genes
This 804 bp open chromatin element is linked to 7 target genes and is bound by 13 transcription factors.
Linked Genes
7 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
C16orf46-DT 6.0 kb Proximal Proximity
C16orf46 6.1 kb Proximal Proximity
GCSH 12.4 kb Distal Multiome
ATMIN 47.7 kb Distal Multiome
CENPN 76.5 kb Distal Multiome
CMC2 76.9 kb Distal Multiome
GAN 231.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:81,078,340 – 81,089,144
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 485 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 420 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 665 bp overlap
ChIP DE DE-FOXA2-2 743 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 684 bp overlap
ChIP DE DE-GATA4-2 764 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 649 bp overlap
ChIP DE DE-GATA6-2 804 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 408 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 795 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 483 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 576 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 276 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 142 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 804 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 610 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 293 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 538 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 804 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 766 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 543 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 804 bp overlap