chr15 : 55,581,323 55,581,979
656 bp 16 TFs 2 linked genes
This 656 bp open chromatin element is linked to PYGO1 and ENSG00000285805 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PYGO1 6.4 kb Proximal Proximity
ENSG00000285805 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:55,576,323 – 55,586,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 168 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 216 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 354 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 325 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 262 bp overlap
ChIP DE DE-FOXA2-1 618 bp overlap
ChIP DE DE-FOXA2-2 630 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 373 bp overlap
ChIP DE DE-GATA4-1 578 bp overlap
ChIP DE DE-GATA4-2 656 bp overlap
ChIP foregut GSE117136.GATA4.foregut 493 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 656 bp overlap
GATA6 11 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 210 bp overlap
ChIP DE DE-GATA6-1 483 bp overlap
ChIP DE DE-GATA6-2 602 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 89 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 630 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 471 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 130 bp overlap
ChIP foregut GSE117136.GATA6.foregut 464 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 388 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 345 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 393 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 365 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 99 bp overlap
RORB 1 dataset
ChIP WTC11 ENCFF444ARW 237 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 487 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 321 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 437 bp overlap
SPI1 10 datasets
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 117 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 110 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 52 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 91 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 110 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 56 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 151 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 112 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 59 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 125 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 74 bp overlap
ZNF18 1 dataset
ChIP HEK293 GSE76494.ZNF18.HEK293 80 bp overlap