chr14 : 89,960,989 89,961,253
264 bp 20 TFs 3 linked genes
This 264 bp open chromatin element is linked to TDP1, EFCAB11, and ENSG00000259053 and is bound by 20 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
TDP1 5.1 kb Proximal Proximity
EFCAB11 6.3 kb Proximal Proximity
ENSG00000259053 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:89,955,989 – 89,966,253
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 55 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 264 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 264 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 63 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 61 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 166 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 148 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF045HUU 264 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 264 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 186 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 264 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 126 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 87 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 159 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 259 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 264 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 174 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 263 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 55 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 167 bp overlap