chr14 : 45,076,441 45,076,652
211 bp 13 TFs 2 linked genes
This 211 bp open chromatin element is linked to PRPF39-DT and PRPF39 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PRPF39-DT 7.3 kb Proximal Proximity
PRPF39 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:45,071,441 – 45,081,652
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 151 bp overlap
FOXA1 2 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 211 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 211 bp overlap
ChIP DE DE-FOXA2-2 211 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 178 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 211 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 211 bp overlap
ChIP DE DE-GATA4-2 211 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 211 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 211 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 211 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 211 bp overlap
ChIP foregut GSE117136.GATA6.foregut 184 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 211 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 203 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 211 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 188 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 211 bp overlap
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 86 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 167 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 211 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 211 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 211 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 211 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 211 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 211 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 211 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 211 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 211 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 211 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 211 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 211 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 211 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 211 bp overlap
TOP1 1 dataset
ChIP LNCaP GSE63202.TOP1.LNCaP 77 bp overlap