chr13 : 79,676,157 – 79,676,547
390 bp 15 TFs 0 linked genes
This 390 bp open chromatin element has no linked target genes and is bound by 15 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:79,671,157 – 79,681,547
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 321 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 202 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 311 bp overlap
CTCF 64 datasets
ChIP BE2C ENCSR000DQD.CTCF.BE2C 141 bp overlap
ChIP Caco-2 ENCFF934QYS 196 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 104 bp overlap
ChIP D721Med ENCFF513FYD 177 bp overlap
ChIP GM23338 ENCFF772DML 167 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 130 bp overlap
ChIP Loucy ENCFF359TVQ 299 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 190 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 155 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 155 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 196 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 197 bp overlap
ChIP Peyer's patch ENCFF828IDE 224 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 144 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 132 bp overlap
ChIP VCaP ENCFF858YQT 177 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 298 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 132 bp overlap
ChIP body of pancreas ENCFF798MEO 75 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 200 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 200 bp overlap
ChIP endodermal cell ENCFF471YCZ 310 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 209 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 234 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 130 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 146 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 274 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 214 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 251 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 301 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 198 bp overlap
ChIP heart left ventricle ENCFF185CKY 279 bp overlap
ChIP heart left ventricle ENCFF244ZHV 230 bp overlap
ChIP heart left ventricle ENCFF354HOQ 280 bp overlap
ChIP heart left ventricle ENCFF548XHH 242 bp overlap
ChIP heart left ventricle ENCFF842XRG 226 bp overlap
ChIP heart left ventricle ENCFF987PUT 302 bp overlap
ChIP heart right ventricle ENCFF027ORH 119 bp overlap
ChIP heart right ventricle ENCFF063GTP 238 bp overlap
ChIP heart right ventricle ENCFF435TKW 270 bp overlap
ChIP heart right ventricle ENCFF577TID 119 bp overlap
ChIP heart right ventricle ENCFF725NNJ 272 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 380 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 219 bp overlap
ChIP hepatocyte ENCFF263BLJ 250 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 188 bp overlap
ChIP keratinocyte ENCFF046PBT 110 bp overlap
ChIP keratinocyte ENCFF291YDC 109 bp overlap
ChIP keratinocyte ENCFF667ULX 227 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 390 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 247 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 196 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 166 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 284 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 229 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 210 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 208 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 171 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 168 bp overlap
ChIP prostate gland ENCFF655GBO 240 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 326 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 171 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 129 bp overlap
ChIP right atrium auricular region ENCFF696NTN 369 bp overlap
FOXA1 13 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 68 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 81 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 131 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 72 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 85 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 145 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 82 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 136 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 102 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 76 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 177 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 164 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 132 bp overlap
FOXA2 6 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 77 bp overlap
ChIP DE DE-FOXA2-1 263 bp overlap
ChIP DE DE-FOXA2-2 212 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 100 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 135 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 140 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 141 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 241 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP H1 ENCFF967OJF 215 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 134 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 100 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
SMC1 2 datasets
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 246 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 255 bp overlap
SMC1A 3 datasets
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 220 bp overlap
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 186 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 304 bp overlap
STAG1 2 datasets
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 209 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 218 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 213 bp overlap
TP63 4 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 301 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 239 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 212 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 219 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 105 bp overlap
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