Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

26 transcription factors

BRD4 2 datasets

ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 199 bp overlap

ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 66 bp overlap

CDK9 2 datasets

ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 65 bp overlap

ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 117 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF346MCV 57 bp overlap

EBF1 1 dataset

ChIP NALM-6 GSE126300.EBF1.NALM-6 131 bp overlap

FOXA1 1 dataset

ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 90 bp overlap

FOXA2 4 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 75 bp overlap

ChIP DE DE-FOXA2-1 293 bp overlap

ChIP DE DE-FOXA2-2 464 bp overlap

ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 59 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 453 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-2 467 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 451 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 273 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 331 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 244 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 136 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 422 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 385 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 298 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 406 bp overlap

NANOG 3 datasets

ChIP WA01 ERP004238.NANOG.WA01 265 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 501 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 378 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NKX2-5 1 dataset

Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap

PAX5 1 dataset

ChIP NALM-6 GSE126300.PAX5.NALM-6 69 bp overlap

PBX1 1 dataset

ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 159 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

POLR2A 1 dataset

ChIP HL-60 ENCFF321XKE 65 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 273 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 300 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 258 bp overlap

RUNX1 2 datasets

ChIP Jurkat GSE68976.RUNX1.Jurkat 95 bp overlap

ChIP NALM-6 GSE126300.RUNX1.NALM-6 69 bp overlap

SMAD2 2 datasets

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 501 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 501 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 501 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 501 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 501 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 400 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 501 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 501 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 501 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 349 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 273 bp overlap

TCF3 1 dataset

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 242 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZMIZ1 1 dataset

ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 118 bp overlap

Genome Browser