chr12 : 107,898,885 – 107,899,053
168 bp 16 TFs 1 linked gene
This 168 bp open chromatin element is linked to ENSG00000258072 and is bound by 16 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000258072 4.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:107,893,885 – 107,904,053
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 63 bp overlap
CRX 1 dataset
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 168 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 168 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 67 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 168 bp overlap
ChIP DE DE-FOXA2-2 166 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCFF475HYF 168 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 168 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 168 bp overlap
ChIP DE DE-GATA4-2 168 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 168 bp overlap
ChIP DE DE-GATA6-2 168 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 161 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 168 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 168 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 168 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 168 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 168 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 152 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 130 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 163 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 168 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 168 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 168 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 168 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 168 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 107 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 168 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 148 bp overlap
ZNF316 1 dataset
ChIP K-562 ENCSR200JYP.ZNF316.K-562 108 bp overlap
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