chr12 : 100,064,385 100,065,093
708 bp 21 TFs 6 linked genes
This 708 bp open chromatin element is linked to 6 target genes and is bound by 21 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
BLTP3B 78.2 kb Distal Multiome
ANKS1B 80.4 kb Distal Multiome
GOLGA2P5 108.6 kb Distal Multiome
ACTR6 136.2 kb Distal Multiome
DEPDC4 202.4 kb Distal Multiome
SCYL2 202.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:100,059,385 – 100,070,093
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
Arid3b 2 datasets
Motif DE_48h DE_48h-Arid3b_MA0601.2 7 bp overlap
Motif DE_60h DE_60h-Arid3b_MA0601.2 7 bp overlap
BCL6B 2 datasets
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
Bach1::Mafk 2 datasets
Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 580 bp overlap
ChIP DE DE-FOXA2-2 708 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 708 bp overlap
ChIP DE DE-GATA4-2 708 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 367 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 708 bp overlap
ChIP DE DE-GATA6-2 708 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 357 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 708 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 468 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 313 bp overlap
GRHL2 2 datasets
Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
Irf1 1 dataset
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
MSC 1 dataset
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
OSR1 1 dataset
Motif DE_48h DE_48h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
Prdm4 1 dataset
Motif DE_48h DE_48h-Prdm4_MA1647.3 11 bp overlap
Rfx6 1 dataset
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
SIX2 2 datasets
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 532 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 639 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 606 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 367 bp overlap
Stat4 2 datasets
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
ZIM3 2 datasets
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
ZNF317 2 datasets
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
ZNF766 4 datasets
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap