chr11 : 90,139,029 90,139,614
585 bp 14 TFs 1 linked gene
This 585 bp open chromatin element is linked to NAALAD2 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NAALAD2 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:90,134,029 – 90,144,614
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 194 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 248 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 269 bp overlap
FOXA1 3 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 257 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 283 bp overlap
ChIP DE DE-FOXA2-1 514 bp overlap
ChIP DE DE-FOXA2-2 527 bp overlap
ChIP HepG2 ENCFF570ABM 405 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 334 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 124 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 548 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 213 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 310 bp overlap
ChIP foregut GSE117136.GATA4.foregut 519 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 470 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 559 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 418 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 247 bp overlap
ChIP DE DE-GATA6-1 585 bp overlap
ChIP DE DE-GATA6-2 585 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 386 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 486 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 511 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 497 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 373 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 307 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 96 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 473 bp overlap
ChIP foregut GSE117136.GATA6.foregut 505 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 271 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 431 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 439 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 466 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 379 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 145 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 340 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 123 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 235 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 143 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 124 bp overlap