chr10 : 132,953,380 132,953,778
398 bp 12 TFs 1 linked gene
This 398 bp open chromatin element is linked to LINC01167 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01167 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:132,948,380 – 132,958,778
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CBX8 4 datasets
ChIP A-549 ENCSR616MOB.CBX8.A-549 398 bp overlap
ChIP A549 ENCFF656LMW 398 bp overlap
ChIP A549 ENCFF656LMW 239 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 270 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 188 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 71 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 398 bp overlap
ChIP DE DE-GATA4-2 398 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 332 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 289 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 372 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 398 bp overlap
ChIP DE DE-GATA6-2 398 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 398 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 398 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 398 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 398 bp overlap
ChIP foregut GSE117136.GATA6.foregut 397 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 365 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 90 bp overlap
RNF2 4 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 222 bp overlap
ChIP A549 ENCFF650XYA 308 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 133 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 124 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 398 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 398 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 366 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 398 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 128 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 398 bp overlap