chr9 : 88,963,044 88,963,643
599 bp 14 TFs 1 linked gene
This 599 bp open chromatin element is linked to S1PR3 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
S1PR3 27.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:88,958,044 – 88,968,643
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 359 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 572 bp overlap
ChIP DE DE-FOXA2-2 492 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 599 bp overlap
ChIP DE DE-GATA4-2 580 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 599 bp overlap
ChIP DE DE-GATA6-2 565 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 456 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 513 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 396 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 599 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 310 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 394 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 501 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 274 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 511 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 337 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 327 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 355 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 599 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 598 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 169 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 456 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 563 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 228 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 138 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 145 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 240 bp overlap
ChIP K562 ENCFF561ZSB 276 bp overlap