Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

CTCF 6 datasets

ChIP 22Rv1 ENCFF466OXN 434 bp overlap

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP H9 ENCFF152GTF 434 bp overlap

ChIP MCF-7 ENCFF139NQI 277 bp overlap

ChIP MCF-7 ENCFF494VXA 231 bp overlap

ChIP endodermal cell ENCFF471YCZ 434 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF274GAT 251 bp overlap

ChIP BLaER1 ENCFF364PUR 232 bp overlap

ELF1 1 dataset

ChIP MCF-7 ENCFF305BNP 349 bp overlap

FOXA1 42 datasets

ChIP 22Rv1 GSE96652.FOXA1.22Rv1 214 bp overlap

ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 294 bp overlap

ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 170 bp overlap

ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 159 bp overlap

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 154 bp overlap

ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 189 bp overlap

ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 249 bp overlap

ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 191 bp overlap

ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 240 bp overlap

ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 189 bp overlap

ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 211 bp overlap

ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 194 bp overlap

ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 284 bp overlap

ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 230 bp overlap

ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 237 bp overlap

ChIP HEC-1-A GSE100789.FOXA1.HEC-1-A 182 bp overlap

ChIP HepG2 ENCFF207NVJ 266 bp overlap

ChIP HepG2 ENCFF361KNY 270 bp overlap

ChIP HepG2 ENCFF740VZW 281 bp overlap

ChIP Ishikawa ENCSR000BKW.FOXA1.Ishikawa 232 bp overlap

ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 230 bp overlap

ChIP LS180 GSE140533.FOXA1.LS180 96 bp overlap

ChIP MCF-7 ENCFF465LTH 233 bp overlap

ChIP MCF-7 GSE81714.FOXA1.MCF-7 209 bp overlap

ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 225 bp overlap

ChIP MCF-7 GSE72249.FOXA1.MCF-7 232 bp overlap

ChIP MCF-7 ERP000380.FOXA1.MCF-7 183 bp overlap

ChIP MCF-7 GSE59530.FOXA1.MCF-7 134 bp overlap

ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 219 bp overlap

ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 150 bp overlap

ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 190 bp overlap

ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 228 bp overlap

ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 170 bp overlap

ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 195 bp overlap

ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 193 bp overlap

ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 170 bp overlap

ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 254 bp overlap

ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 234 bp overlap

ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 174 bp overlap

ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 247 bp overlap

ChIP PDAC GSE64557.FOXA1.PDAC 267 bp overlap

ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 327 bp overlap

FOXA2 8 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 237 bp overlap

ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 281 bp overlap

ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 217 bp overlap

ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 243 bp overlap

ChIP DE DE-FOXA2-1 309 bp overlap

ChIP DE DE-FOXA2-2 324 bp overlap

ChIP HepG2 ENCFF533COJ 268 bp overlap

ChIP HepG2 ENCFF894AYY 340 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCFF299RSE 83 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

IRF3 1 dataset

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

MNT 1 dataset

ChIP MCF-7 ENCFF144ZFZ 321 bp overlap

Msgn1 1 dataset

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

ZBTB24 1 dataset

ChIP HCT-116 GSE111683.ZBTB24.HCT-116 54 bp overlap

ZBTB6 2 datasets

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap

Genome Browser