chr6 : 82,251,223 – 82,251,913
690 bp 13 TFs 1 linked gene
This 690 bp open chromatin element is linked to IBTK and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
IBTK 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:82,246,223 – 82,256,913
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 139 bp overlap
CTCF 78 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 580 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 279 bp overlap
ChIP C4-2B ENCFF821XVN 67 bp overlap
ChIP C4-2B ENCFF821XVN 67 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 424 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 58 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 104 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 236 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 110 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 225 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 165 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 181 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 146 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 205 bp overlap
ChIP GM13977 ENCSR000DLB.CTCF.GM13977 99 bp overlap
ChIP GM23338 ENCFF832KWE 70 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 205 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 356 bp overlap
ChIP HFFc6 ENCFF005CJI 89 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 95 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 409 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 183 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 229 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 127 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 216 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 154 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 195 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 135 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 85 bp overlap
ChIP RWPE1 ENCFF200GQF 59 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 393 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 85 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 128 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 141 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 63 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 86 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 159 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 127 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 70 bp overlap
ChIP WTC11 ENCFF658QVH 82 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 116 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 53 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 81 bp overlap
ChIP chondrocyte ENCFF134ORZ 241 bp overlap
ChIP colonic mucosa ENCFF319RUN 66 bp overlap
ChIP coronary artery ENCFF383OZM 163 bp overlap
ChIP coronary-artery ENCSR447ANW.CTCF.coronary-artery 63 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF092NXX 59 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 54 bp overlap
ChIP endothelial cell ENCFF663LIE 55 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 313 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 261 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 96 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 88 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 67 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 481 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 74 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 70 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 625 bp overlap
ChIP left lung ENCFF620MAT 58 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 89 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 83 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 562 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 188 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 135 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 164 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 182 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 251 bp overlap
ChIP sigmoid colon ENCFF397ZZF 66 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 300 bp overlap
ChIP spleen ENCFF065CBS 123 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 150 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 84 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 83 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 59 bp overlap
ChIP testis ENCFF919VBQ 53 bp overlap
ChIP transverse colon ENCFF454PBI 70 bp overlap
ChIP vagina ENCFF026NYX 51 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 117 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 633 bp overlap
ChIP DE DE-FOXA2-2 497 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 240 bp overlap
ChIP DE DE-GATA4-1 562 bp overlap
ChIP DE DE-GATA4-2 652 bp overlap
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 539 bp overlap
ChIP DE DE-GATA6-2 690 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 317 bp overlap
ChIP foregut GSE117136.GATA6.foregut 427 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF854JLR 156 bp overlap
IRF1 1 dataset
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 139 bp overlap
PKNOX1 1 dataset
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 253 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 130 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 86 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 90 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 172 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 428 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 139 bp overlap
THRB 1 dataset
ChIP HepG2 ENCFF476INC 55 bp overlap
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