Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

19 transcription factors

CDX2 4 datasets

ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 94 bp overlap

ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 131 bp overlap

ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 163 bp overlap

ChIP LS180 GSE31939.CDX2.LS180 158 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 228 bp overlap

FOXA2 2 datasets

ChIP Caco-2 GSE66218.FOXA2.Caco-2 165 bp overlap

ChIP DE DE-FOXA2-1 312 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 6 datasets

ChIP DE DE-GATA4-1 469 bp overlap

ChIP DE DE-GATA4-2 483 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 301 bp overlap

ChIP foregut GSE117136.GATA4.foregut 349 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 284 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 12 datasets

ChIP AGS GSE51705.GATA6.AGS 209 bp overlap

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 444 bp overlap

ChIP DE DE-GATA6-1 468 bp overlap

ChIP DE DE-GATA6-2 452 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 518 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 565 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 420 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 628 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 588 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 536 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 373 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HMBOX1 1 dataset

Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap

HNF4A 3 datasets

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 96 bp overlap

ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 87 bp overlap

ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 402 bp overlap

KLF4 1 dataset

Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 468 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 414 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 405 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 499 bp overlap

SMAD4 1 dataset

ChIP Caco-2 GSE112946.SMAD4.Caco-2 169 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 345 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 283 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Genome Browser