chr6 : 76,381,715 76,382,140
425 bp 26 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:76,376,715 – 76,387,140
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
CTCF 29 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM23338 ENCFF531QOI 242 bp overlap
ChIP GM23338 ENCFF772DML 188 bp overlap
ChIP H1 ENCFF414GZI 213 bp overlap
ChIP H1 ENCFF764RHO 99 bp overlap
ChIP H9 ENCFF152GTF 277 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 186 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 209 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 212 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 181 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 195 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 187 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 210 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 197 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 196 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 157 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 123 bp overlap
ChIP endodermal cell ENCFF471YCZ 217 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 163 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 147 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 142 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 157 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 186 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 147 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 233 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 172 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 163 bp overlap
ChIP neural progenitor cell ENCFF420RBO 292 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 195 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 245 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
RAD21 13 datasets
ChIP H1 ENCFF698EWO 162 bp overlap
ChIP H1 ENCFF967OJF 142 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 148 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 178 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 257 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 252 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 154 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 215 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 163 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 199 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 206 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 181 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 247 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap