chr1 : 110,612,853 110,613,183
330 bp 11 TFs 1 linked gene
This 330 bp open chromatin element is linked to KCNA2 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNA2 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:110,607,853 – 110,618,183
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 218 bp overlap
ESR1 9 datasets
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 69 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 52 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 72 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 135 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 149 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 64 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 120 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 77 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 50 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 330 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 330 bp overlap
ChIP DE DE-FOXA2-2 330 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 330 bp overlap
ChIP DE DE-GATA4-2 317 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 276 bp overlap
ChIP DE DE-GATA6-2 306 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 89 bp overlap
RBM25 1 dataset
ChIP K-562 ENCSR791OZM.RBM25.K-562 240 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 112 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 117 bp overlap
ChIP K562 ENCFF281INV 66 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 317 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 269 bp overlap