chr6 : 39,233,313 39,233,532
219 bp 13 TFs 1 linked gene
This 219 bp open chromatin element is linked to KCNK5 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNK5 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:39,228,313 – 39,238,532
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 219 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 158 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 151 bp overlap
ChIP K562 ENCFF673OEZ 86 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF895KGN 190 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 219 bp overlap
ChIP DE DE-FOXA2-2 188 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 136 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 219 bp overlap
ChIP DE DE-GATA4-2 219 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 219 bp overlap
ChIP DE DE-GATA6-2 219 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 219 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 219 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 219 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 219 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 219 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 219 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 219 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 105 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 219 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 219 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 219 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 123 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 219 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 196 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 219 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 219 bp overlap
TAL1 1 dataset
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 76 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 103 bp overlap