chr5 : 124,439,598 124,439,860
262 bp 11 TFs 1 linked gene
This 262 bp open chromatin element is linked to LINC01170 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01170 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:124,434,598 – 124,444,860
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 140 bp overlap
BRD4 3 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 262 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 262 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 62 bp overlap
MAX 3 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 236 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 207 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 217 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 153 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 262 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 110 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 134 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 157 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 259 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 192 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 228 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 121 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 93 bp overlap