chr5 : 109,327,650 109,327,976
326 bp 19 TFs 1 linked gene
This 326 bp open chromatin element is linked to ENSG00000249476 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000249476 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:109,322,650 – 109,332,976
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 273 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 232 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 128 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 215 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 326 bp overlap
HNF1A 1 dataset
ChIP HEE_5 GSE76376.HNF1A.HEE_5 141 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 285 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 189 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 123 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 212 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 202 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 136 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 126 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 189 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 120 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 188 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 326 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 157 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 151 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 326 bp overlap