chr5 : 53,879,781 53,879,970
189 bp 14 TFs 1 linked gene
This 189 bp open chromatin element is linked to ENSG00000272416 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000272416 1.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:53,874,781 – 53,884,970
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 106 bp overlap
BRD4 1 dataset
ChIP HEK293T GSE51633.BRD4.HEK293T 107 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 51 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 118 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 105 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 146 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 189 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 137 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 124 bp overlap
RBM22 2 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 159 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 159 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 153 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 189 bp overlap
SOX2 1 dataset
ChIP HCC95 GSE137459.SOX2.HCC95 52 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 90 bp overlap