chr5 : 37,849,536 37,849,692
156 bp 11 TFs 2 linked genes
This 156 bp open chromatin element is linked to GDNF and GDNF-AS1 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GDNF 9.5 kb Proximal Proximity
GDNF-AS1 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:37,844,536 – 37,854,692
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 156 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 156 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 146 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 156 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 156 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 156 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 156 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 132 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 156 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 142 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 156 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 143 bp overlap