chr5 : 28,778,202 28,778,480
278 bp 10 TFs 0 linked genes
This 278 bp open chromatin element has no linked target genes and is bound by 10 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:28,773,202 – 28,783,480
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
10 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 186 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 116 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 240 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 104 bp overlap
ChIP foregut GSE117136.GATA4.foregut 268 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-1 278 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 151 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 179 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 202 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 129 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 108 bp overlap
TAL1 1 dataset
ChIP CD34 GSE52924.TAL1.CD34 105 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 185 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 185 bp overlap