chr5 : 1,596,630 1,596,859
229 bp 15 TFs 3 linked genes
This 229 bp open chromatin element is linked to LINC03067, ENSG00000291055, and SDHAP3 and is bound by 15 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
LINC03067 2.0 kb Proximal Proximity
ENSG00000291055 2.0 kb Proximal Proximity
SDHAP3 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:1,591,630 – 1,601,859
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EHF 1 dataset
ChIP A549 ENCFF352AOI 92 bp overlap
EP300 2 datasets
ChIP upper lobe of left lung ENCFF024QBJ 181 bp overlap
ChIP upper lobe of left lung ENCFF720RAR 181 bp overlap
FOXA1 1 dataset
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 133 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 119 bp overlap
ChIP DE DE-FOXA2-1 229 bp overlap
ChIP DE DE-FOXA2-2 229 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 103 bp overlap
FOXS1 1 dataset
ChIP A549 ENCFF870VDS 81 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 155 bp overlap
HOXB13 1 dataset
ChIP A549 ENCFF870NOA 149 bp overlap
HOXB5 1 dataset
ChIP A549 ENCFF891VDO 104 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 190 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 180 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 114 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 229 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 82 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 98 bp overlap