Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

19 transcription factors

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 155 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 186 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 198 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 198 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 188 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 198 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 198 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 198 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 198 bp overlap

FLI1 2 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 198 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 180 bp overlap

FOXA1 7 datasets

ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 140 bp overlap

ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 95 bp overlap

ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 198 bp overlap

ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 198 bp overlap

ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 128 bp overlap

ChIP LNCaP GSE64656.FOXA1.LNCaP 126 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 198 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 198 bp overlap

ChIP DE DE-FOXA2-2 198 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 198 bp overlap

ChIP DE DE-GATA4-2 198 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 198 bp overlap

ChIP DE DE-GATA6-2 198 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 198 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 198 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 198 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 198 bp overlap

HMGA1 1 dataset

ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 178 bp overlap

MEF2D 1 dataset

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 154 bp overlap

NEUROD1 3 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 162 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 198 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 198 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 198 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 198 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 198 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 198 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 191 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 198 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 198 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 180 bp overlap

SUPT5H 1 dataset

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 112 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 198 bp overlap

Genome Browser