chr4 : 145,646,855 145,647,269
414 bp 12 TFs 1 linked gene
This 414 bp open chromatin element is linked to ENSG00000248356 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000248356 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:145,641,855 – 145,652,269
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 155 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 178 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 207 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 135 bp overlap
ESR1 1 dataset
ChIP T-47D-B GSE80358.ESR1.T-47D-B 129 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 320 bp overlap
ChIP DE DE-FOXA2-1 414 bp overlap
ChIP DE DE-FOXA2-2 241 bp overlap
GATA3 2 datasets
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 271 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 193 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 414 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 414 bp overlap
ChIP DE DE-GATA6-2 414 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 295 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 402 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 302 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 358 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 267 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 234 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 184 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 103 bp overlap