chr4 : 118,848,987 118,849,193
206 bp 12 TFs 1 linked gene
This 206 bp open chromatin element is linked to SYNPO2 and is bound by 12 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SYNPO2 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:118,843,987 – 118,854,193
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 206 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 167 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 206 bp overlap
ChIP DE DE-FOXA2-2 206 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 145 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 206 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 206 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 206 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 206 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 206 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 206 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 206 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 206 bp overlap
ChIP foregut GSE117136.GATA6.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 206 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 169 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 203 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 65 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 73 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 100 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 177 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 114 bp overlap
TP53 1 dataset
ChIP IMR-90 GSE42728.TP53.IMR-90 119 bp overlap