chr1 : 79,494,458 79,494,627
169 bp 11 TFs 1 linked gene
This 169 bp open chromatin element is linked to ENSG00000288822 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000288822 644 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:79,489,458 – 79,499,627
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
AR 6 datasets
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 95 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 128 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 135 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 157 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 165 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 169 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 72 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 101 bp overlap
ChIP DE DE-FOXA2-1 169 bp overlap
ChIP DE DE-FOXA2-2 169 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 169 bp overlap
GATA3 1 dataset
ChIP Kelly GSE94822.GATA3.Kelly 55 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 169 bp overlap
ChIP DE DE-GATA4-1 169 bp overlap
ChIP DE DE-GATA4-2 169 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 169 bp overlap
ChIP foregut GSE117136.GATA4.foregut 169 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 169 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 169 bp overlap
ChIP DE DE-GATA6-2 169 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 93 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 169 bp overlap
ChIP foregut GSE117136.GATA6.foregut 169 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 169 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 169 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 169 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 97 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 137 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 87 bp overlap