chr4 : 112,654,381 112,654,747
366 bp 14 TFs 6 linked genes
This 366 bp open chromatin element is linked to 6 target genes and is bound by 14 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
MIR302CHG 5.6 kb Proximal Proximity
MIR302B 5.8 kb Proximal Proximity
MIR302C 6.0 kb Proximal Proximity
MIR302A 6.1 kb Proximal Proximity
MIR302D 6.3 kb Proximal Proximity
LARP7 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,649,381 – 112,659,747
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 366 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 319 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 366 bp overlap
ChIP DE DE-FOXA2-2 366 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 366 bp overlap
ChIP DE DE-GATA4-2 366 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 330 bp overlap
ChIP foregut GSE117136.GATA4.foregut 366 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 275 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 366 bp overlap
ChIP DE DE-GATA6-2 366 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 366 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 366 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 366 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 366 bp overlap
ChIP foregut GSE117136.GATA6.foregut 366 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 264 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 112 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 366 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 356 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 258 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 142 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 256 bp overlap
SRSF9 1 dataset
ChIP Hep-G2 ENCSR624GNZ.SRSF9.Hep-G2 206 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 285 bp overlap