chr4 : 112,641,720 112,642,218
498 bp 15 TFs 7 linked genes
This 498 bp open chromatin element is linked to 7 target genes and is bound by 15 transcription factors.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
LARP7 4.6 kb Proximal Proximity
ZGRF1 4.9 kb Proximal Proximity
MIR302D 5.9 kb Proximal Proximity
MIR302A 6.0 kb Proximal Proximity
MIR302C 6.2 kb Proximal Proximity
MIR302B 6.3 kb Proximal Proximity
MIR302CHG 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,636,720 – 112,647,218
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 186 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 255 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 185 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 238 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 302 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 246 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 91 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 189 bp overlap
ChIP HepG2 ENCFF743ZOF 104 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 185 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 312 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 391 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 112 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 84 bp overlap
ZNF565 1 dataset
ChIP HEK293T GSE78099.ZNF565.HEK293T 286 bp overlap
ZNF681 1 dataset
ChIP HEK293T GSE78099.ZNF681.HEK293T 239 bp overlap