chr1 : 76,908,284 – 76,908,820
536 bp 16 TFs 0 linked genes
This 536 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:76,903,284 – 76,913,820
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 350 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 479 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 158 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-2 89 bp overlap
ChIP DE DE-FOXA2-2 301 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 434 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 375 bp overlap
ChIP DE DE-GATA4-2 531 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 416 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 536 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 536 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 433 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 536 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 536 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 196 bp overlap
NANOG 1 dataset
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 110 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 157 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 536 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 449 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 407 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 525 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 309 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 150 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 252 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 169 bp overlap
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