chr1 : 75,800,086 75,801,044
958 bp 11 TFs 1 linked gene
This 958 bp open chromatin element is linked to MSH4 and is bound by 11 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MSH4 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:75,795,086 – 75,806,044
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 219 bp overlap
ChIP Aska-SS GSE108025.ARID2.Aska-SS 376 bp overlap
CTBP2 2 datasets
ChIP LNCaP_DHT24H GSE58428.CTBP2.LNCaP_DHT24H 250 bp overlap
ChIP LNCaP_DHT24H GSE58428.CTBP2.LNCaP_DHT24H 231 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 179 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 202 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 182 bp overlap
NONO 1 dataset
ChIP Hep-G2 GSE120104.NONO.Hep-G2 193 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 92 bp overlap
POLR2A 2 datasets
ChIP GM12891 ENCFF012SUT 332 bp overlap
ChIP H1 ENCFF566JSR 407 bp overlap
SUPT5H 6 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 896 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 288 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 106 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 930 bp overlap
ChIP HCT-116_DMSO_pSer666 GSE138548.SUPT5H.HCT-116_DMSO_pSer666 272 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 226 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 414 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 118 bp overlap