chr3 : 166,342,331 166,343,035
704 bp 25 TFs 0 linked genes
This 704 bp open chromatin element has no linked target genes and is bound by 25 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:166,337,331 – 166,348,035
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 135 bp overlap
DMRTA2 1 dataset
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 213 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 420 bp overlap
ChIP DE DE-FOXA2-2 386 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 195 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 284 bp overlap
ChIP DE DE-GATA4-2 305 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 325 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 355 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 213 bp overlap
KLF3 1 dataset
Motif DE_60h DE_60h-KLF3_MA1516.2 10 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 229 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 200 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 500 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 253 bp overlap
Rhox11 1 dataset
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 259 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 125 bp overlap
Spz1 1 dataset
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
THAP1 1 dataset
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
ZIC1 1 dataset
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF528 1 dataset
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
ZSCAN31 1 dataset
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap