chr3 : 137,268,902 137,269,528
626 bp 16 TFs 0 linked genes
This 626 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:137,263,902 – 137,274,528
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP RH4 GSE83726.CTCF.RH4 60 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 556 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 296 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 291 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 512 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 527 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 544 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 316 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 568 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 535 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 336 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 363 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 391 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 167 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 194 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 205 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 408 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 414 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 416 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 426 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 290 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 251 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 165 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 526 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 613 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap