chr1 : 63,590,562 63,590,743
181 bp 14 TFs 1 linked gene
This 181 bp open chromatin element is linked to PGM1 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PGM1 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:63,585,562 – 63,595,743
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 181 bp overlap
ChIP K562 ENCFF673OEZ 181 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 181 bp overlap
ChIP DE DE-FOXA2-2 78 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 181 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 69 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 181 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 181 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 166 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 111 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 130 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 62 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 160 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 181 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 181 bp overlap
ChIP DE DE-GATA4-2 181 bp overlap
ChIP foregut GSE117136.GATA4.foregut 181 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 181 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 181 bp overlap
ChIP AGS GSE51936.GATA6.AGS 98 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 147 bp overlap
ChIP DE DE-GATA6-1 181 bp overlap
ChIP DE DE-GATA6-2 181 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 181 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 181 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 181 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 181 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 181 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 181 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 169 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 181 bp overlap
ChIP foregut GSE117136.GATA6.foregut 181 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 181 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 181 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 181 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF501FEC 83 bp overlap
ChIP body of pancreas ENCFF727UBE 140 bp overlap
ChIP transverse colon ENCFF610RWV 58 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 181 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 181 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 164 bp overlap
ChIP KGN_TGF GSE138496.SMAD2-3.KGN_TGF 121 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 107 bp overlap
TAL1 6 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 134 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 163 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 181 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 181 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 145 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 181 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 181 bp overlap
ChIP K562 ENCFF931DJY 181 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 55 bp overlap