chr3 : 123,588,179 123,588,401
222 bp 11 TFs 2 linked genes
This 222 bp open chromatin element is linked to MYLK-AS1 and HACD2 and is bound by 11 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MYLK-AS1 2.9 kb Proximal Proximity
HACD2 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:123,583,179 – 123,593,401
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
11 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 214 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 222 bp overlap
ChIP DE DE-GATA4-2 222 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 222 bp overlap
ChIP DE DE-GATA6-2 222 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 222 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 222 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 222 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 222 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 222 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 222 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 222 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 222 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 157 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 107 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 222 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 222 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 222 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 222 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 222 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 222 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 222 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 222 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 222 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 193 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 222 bp overlap
ZNF680 1 dataset
ChIP HEK293 ENCFF418WHE 222 bp overlap